Faculty > Scott L. Diamond

Scott L. Diamond

Arthur E. Humphrey Professor of Chemical and Biomolecular Engineering and Bioengineering; Associate Director and Charter Member, Institute for Medicine and Engineering; Director, Biotechnology Program; Director, Penn Center for Molecular Discovery

B.S., Chemical Engineering, Cornell University, 1986
Ph.D., Chemical Engineering, Rice University, 1990

email:
phone: 215-573-5702
Diamond Laboratory Link http://www.seas.upenn.edu/~diamond

Current Focus of Research

Endothelial Cell Mechanobiology

This research ultilizes molecular and cell biology approches to explore issues related to cardiovascular disease of the arterial system. Our focus is on how physical forces generated by blood flow (hemodynamics) regulate blood vessel wall biology. Vascular surgeons and pathologists have long recognized that atherosclerotic lesions are localized at sites of low and disturbed blood flow. Additionally, physiologists have recognized that the endothelium plays an important role in matching the vessel diameter to the blood flow through vessel. Yet how does an endothelial cell respond to its hemodynamic environment? To date, our investigations have shown that the expression of several genes is altered when endothelial cells are exposed to arterial levels of physical forces. We have found that the gene for the blood clot dissolver, tissue plasminogen activator (tPA) is upregulated. Also, we have found that the expression of two separate dilatory pathways involving nitric oxide synthase type III (endothelial NOS, eNOS) and C-type natriuretic peptide (CNP) are induced by flow. Both eNOS and CNP are generally associated with inhibitory activity against smooth muscle cell intimal hyperplasia. Conversely, the expression of the potent vasoconstrictor and smooth muscle cell mitogen, endothelin, is shut off by arterial shear forces. We are interested in defining and promoting the hemodynamic regulation of endothelial phenotypes associated with enhanced vasodilatory activity and smooth muscle cell growth antagonism.

Thrombosis and Thrombolytics

Thrombolytic therapy is well established in the US as a treatment for acute MI as well as for peripheral arterial and venous thrombosis. Thrombolytic treatment of stroke is in the developmental stage. However, the therapies are still evolving and much remains to be done to improve efficacy and safety. Presently, there is not a suitable theoretical basis by which clinical outcomes are quantitatively linked in mechanistic terms to pharmacodynamics. A goal of our research is the advancement of large scale computations to simulate intravenous, intracoronary, or intrathrombic delivery of a combination of lytic agents to a given clot structure/comoposition for coronary, peripheral artery, and venous thrombolysis. A number of unresolved issues still exist regarding thrombolytic therapy. It is not clear why reperfusion rates decrease so dramatically if therapy is initiated after 4 to 6 hr after onset of MI symptoms. Changes in biochemistry, clot structure, and transport phenomena may play a role. Also, it is not clear why some clot structures and some patient subsets are poor candidates for thrombolytic therapy. We are conducting experimental and theoretical investigations of blood clotting and blood clot dissolving reactions under realistic hemodynamic conditions. We seek to define the quantitative relationship between the pharmacodynamics of a given thrombolytic therapy, the composition and location of a thrombus, and the consequent reperfusion time and flow rate. Particular attention is placed on the penetration rates of plasma constituents into thrombi (driven by hemodynamic pressures) and the consequent dissolution dynamics. We are advancing the use of computer simulation of the clot dissolving reactions using biphasic, multicomponent convection-dispersion-reaction equations for erodible fibrin structures with heterogeneous adsorption and reaction. Coupled with pharmacodynamic modeling of the systemic circulation, these computer simulations help predict rates of clot reperfusion, causes of clot cannulation, as well as, help evaluate therapeutic approaches for annular clots remaining after cannulation. Additionally, the design of catheters for local thrombolytics requires accurate understanding of coupled reaction-transport processes.

Endothelial Gene Therapyapy

Gene transfer by nonviral methodologies (e.g. lipofection) are not efficient in cell populations with low mitotic rates. Unfortunately, cells are not actively dividing in many in vivo tissues that are potential clinical targets for Gene Therapyapy. While receptor targeting, fusogenic peptides, or endosome disrupting agents help overcome some of the first barriers that limit liposome-based gene delivery, virus free gene transfer using liposomes will have limited clinical utility because of the difficulty of transporting genetic material into the nucleus of a nondividing cell. We propose research to understand and potentially overcome this final rate limit of nuclear entry encounted with lipofection of nondividing cells. We seek to develop methodologies for delivering large genetic packages into the nucleus of nondividing cells. This will be critical for the success of nonviral mediated Gene Therapyapy in vivo and various tissue engineering applications where the low mitotic index of target cells would greatly limits the impact of many potential therapies. Research will use: cultured bovine and human endothelial cells and other mammalian cell types, various liposome chemistries, and viral and cellular-derived components that may facilitate nuclear penetration of plasmids with marker genes that include b-galactosidase and mutant forms of green fluorescent protein (GFP). Also, epifluorescence microscopy and fluorescence spectroscopy will be used to identify cellular localization and quantities of fluorescent proteins or reaction products. Liposome mediated gene transfer is a potentially important clinical alternative to viral routes since there is less risk of immune response. From a regulatory, manufacturing, economic, and ease-of-use standpoint, liposomal routes offer many advantages over viral routes. For lipofection routes to succeed, however, a major problem to overcome is low transfection efficiency of nondividing cells. Similarly, retrovirus gene transfer may benefit from such approaches

Honors and Awards:

• 1999 American Institute of Chemical Engineers Allan P. Colburn Award
• 1999 National American Heart Association Established Investigator Award
• 1993 NSF National Young Investigator Award
• 1992 NIH FIRST Award
• 1992 University Teaching Scholar, State University of New York.
• Graduate Fellowship, Robert A. Welch Foundation, Rice University.
• Teaching Incentive Grant, General Electric Foundation.

Myers MC, Shah PP, Beavers MP, et al. Design, synthesis, and evaluation of inhibitors of cathepsin L: Exploiting a unique thiocarbazate chemotype. Bioorganic & Medicinal Chemistry Letters. (2008)

Neeves KB and Diamond SL. A membrane-based microfluidic device for controlling the flux of platelet agonists into flowing blood. Lab Chip. 8, 701-9 (2008)

Myers MC, Shah PP, Diamond SL, et al. Identification and synthesis of a unique thiocarbazate cathepsin L inhibitor. Bioorganic & Medicinal Chemistry Letters. 18, 210-4 (2008)

de Almeida RA, Burgess D, Shema R, et al. A Saccharomyces cerevisiae cell-based quantitative beta-galactosidase assay compatible with robotic handling and high-throughput screening. Yeast. 25, 71-6 (2008)

Shah PP, Myers MC, Beavers MP, et al. Kinetic Characterization and Molecular Docking of a Novel, Potent, and Selective Slow-binding Inhibitor of Human Cathepsin L. Molecular Pharmacology. (2008)

Okorie UM, Denney WS, Chatterjee MS, et al. Determination of surface tissue factor thresholds that trigger coagulation at venous and arterial shear rates: amplification of 100 fM circulating tissue factor requires flow. Blood. 111, 3507-13 (2008)

Ji JY, Jing H and Diamond SL. Hemodynamic regulation of inflammation at the endothelial-neutrophil interface. Annals of Biomedical Engineering. 36, 586-95 (2008)

Myers MC, Napper AD, Motlekar N, et al. Identification and characterization of 3-substituted pyrazolyl esters as alternate substrates for cathepsin B: The confounding effects of DTT and cysteine in biological assays. Bioorganic & Medicinal Chemistry Letters. 17, 4761-4766 (2007)

Price AR, Limberis MP, Wilson JM, et al. Pulmonary delivery of adenovirus vector formulated with dexamethasone-spermine facilitates homologous vector re-administration. Gene Therapy. 14, 1594-604 (2007)

Handwerger RG and Diamond SL. Biotinylated photocleavable polyethylenimine: capture and triggered release of nucleic acids from solid supports. Bioconjugate Chemistry. 18, 717-23 (2007)

Gruneich JA and Diamond SL. Synthesis and structure-activity relationships of a series of increasingly hydrophobic cationic steroid lipofection reagents. Journal of Gene Medicine. 9, 381-91 (2007)

Murphy BR, Moayedpardazi HS, Gewirtz AM, et al. Delivery and mechanistic considerations for the production of knock-in mice by single-stranded oligonucleotide gene targeting. Gene Therapy. 14, 304-15 (2007)

Diamond SL. Methods for mapping protease specificity. Current Opinion in Chemical Biology. 11, 46-51 (2007)

Okorie UM and Diamond SL. Matrix protein microarrays for spatially and compositionally controlled microspot thrombosis under laminar flow. Biophysics Journal. 91, 3474-81 (2006)

Kim MS and Diamond SL. Controlled release of DNA/polyamine complex by photoirradiation of a solid phase presenting o-nitrobenzyl ether tethered spermine or polyethyleneimine. Bioorganic & Medicinal Chemistry Letters. 16, 5572-5 (2006)

Ganguly K, Goel MS, Krasik T, et al. Fibrin affinity of erythrocyte-coupled tissue-type plasminogen activators endures hemodynamic forces and enhances fibrinolysis in vivo. Journal of Pharmacology and Experimental Therapeutics. 316, 1130-6 (2006)

Laurenzi IJ, Bartels JD and Diamond SL. Regression of multicomponent sticking probabilities using a genetic algorithm. Industrial & Engineering Chemistry Research. 45, 5482-5488 (2006)

Kim MS and Diamond SL. Photocleavage of o-nitrobenzyl ether derivatives for rapid biomedical release applications. Bioorganic & Medicinal Chemistry Letters. 16, 4007-10 (2006)

Price A, Limberis M, Gruneich JA, et al. Targeting viral-mediated transduction to the lung airway epithelium with the anti-inflammatory cationic lipid dexamethasone-spermine. Molecular Therapy. 12, 502-9 (2005)

Edmondson KE, Denney WS and Diamond SL. Neutrophil-bead collision assay: pharmacologically induced changes in membrane mechanics regulate the PSGL-1/P-selectin adhesion lifetime. Biophysical Journal. 89, 3603-14 (2005)

Gosalia DN, Salisbury CM, Ellman JA, et al. High throughput substrate specificity profiling of serine and cysteine proteases using solution-phase fluorogenic peptide microarrays. Molecular & Cellular Proteomics. 4, 626-636 (2005)

Simmons G, Gosalia DN, Rennekamp AJ, et al. Inhibitors of cathepsin L prevent severe acute respiratory syndrome coronavirus entry. Proceedings of the National Academy of Sciences U S A. 102, 11876-81 (2005)

Ma H, Horiuchi KY, Wang Y, et al. Nanoliter homogenous ultra-high throughput screening microarray for lead discoveries and IC50 profiling. Assay and Drug Development Technologies. 3, 177-87 (2005)

Gosalia DN, Salisbury CM, Maly DJ, et al. Profiling serine protease substrate specificity with solution phase fluorogenic peptide microarrays. Proteomics. 5, 1292-8 (2005)

Lo K, Denney WS and Diamond SL. Stochastic modeling of blood coagulation initiation. Pathophysiology of Haemostasis and Thrombosis. 34, 80-90 (2005)

Lo K and Diamond SL. Blood coagulation kinetics: high throughput method for real-time reaction monitoring. Thrombosis and Haemostasis. 92, 874-82 (2004)

Ji JY and Diamond SL. Exogenous nitric oxide activates the endothelial glucocorticoid receptor. Biochemical and Biophysical Research Communications. 318, 192-7 (2004)

Ma H, Liu Q, Diamond SL, et al. Mouse embryonic stem cells efficiently lipofected with nuclear localization peptide result in a high yield of chimeric mice and retain germline transmission potency. Methods. 33, 113-20 (2004)

Kadash KE, Lawrence MB and Diamond SL. Neutrophil string formation: hydrodynamic thresholding and cellular deformation during cell collisions. Biophysical Journal. 86, 4030-9 (2004)

Goel MS and Diamond SL. Factor VIIa-mediated tenase function on activated platelets under flow. Journal of Thrombosis and Haemostasis. 2, 1402-10 (2004)

Gruneich JA, Price A, Zhu J, et al. Cationic corticosteroid for nonviral gene delivery. Gene Therapy. 11, 668-74 (2004)

Laurenzi IJ and Diamond SL. Kinetics of random aggregation-fragmentation processes with multiple components. Physical Review E Statistical, Nonlinear, and Soft Matter Physics. 67, 051103 (2003)

Goel MS and Diamond SL. Neutrophil cathepsin G promotes prothrombinase and fibrin formation under flow conditions by activating fibrinogen-adherent platelets. Journal of Biological Chemistry. 278, 9458-63 (2003)

Gosalia DN and Diamond SL. Printing chemical libraries on microarrays for fluid phase nanoliter reactions. Proceedings of the National Academy of Sciences. 100, 8721-6 (2003)

Doggett TA, Girdhar G, Lawshe A, et al. Alterations in the intrinsic properties of the GPIbα-VWF tether bond define the kinetics of the platelet-type von Willebrand disease mutation, Gly233Val. Blood. 102, 152-60 (2003)

Pierce EA, Liu Q, Igoucheva O, et al. Oligonucleotide-directed single-base DNA alterations in mouse embryonic stem cells. Gene Therapy. 10, 24-33 (2003)

Ji JY, Jing H and Diamond SL. Shear stress causes nuclear localization of endothelial glucocorticoid receptor and expression from the GRE promoter. Circulation Research. 92, 279-85 (2003)

I.J. Laurenzi, S.L. Diamond. Kinetics of Reversible Aggregation and Gelation with Multiple Components. Phys. Rev. E. 67, 51103 (2003)

J. Y. Ji, H. Jing, S. L. Diamond. Shear stress enhances nuclear localization of endothelial glucocorticoid receptor and expression from the GRE promoter. Circulation Research. 92, 279 (2003).

M.Goel, S.L. Diamond. Neutrophil cathepsin G enhances prothrombinase and fibrin formation under flow by activating fibrinogen-adherent platelets. Journal of Biological Chemistry. 278, 9458 (2003).

E. A. Pierce, Q. Liu, O. Igoucheva, H.Ma, R. Omarrudin, S. L. Diamond, K. Yoon. Oligonucleotide-directed single base DNA alterations in mouse embryonic stem cells. Gene Therapy. 10:24 (2003).

M. Goel, S. L. Diamond. Thrombosis. Encyclopedia of Biomaterials and Biomedical Engineering. Eds. G. E. Wnek, G. L. Bowlin. Marcel Dekker. In press. (2003).

J. M. Abrahams, S. L. Diamond. Biological and Future Management of Aneuryms. In "Management of Cerebral Aneurysms." Eds. P.D. LeRoux and H.R. Winn. Elsevier Science. In press (2003).

T.A. Doggett, G. Girdhar, A. Lawshe, J.L. Miller, I.J. Laurenzi, S.L. Diamond, T.G. Diacovo. Kinetic analysis of mutant GPIb alpha-vWF-A1 bonds reveal similarities between genetically distinct bleeding disorders. Blood. In press (2003).

D. Gosalia, S.L. Diamond. Printing chemical libraries for nanoliter fluid phase reactions. Proceedings of the National Academy of Sciences. USA (Track II) In press. (2003).

M. Goel, S. L. Diamond, Adhesion of Normal Erythrocytes to Activated Neutrophils, Activated Platelets, and Fibrin Polymerized from Plasma at Depressed Venous Shear Rates, Blood, 100, 3739 (2002).

A. Subramanian, H. Ma, K.N. Dahl, J. Zhu, and S.L. Diamond. Adenovirus or HA-2 peptide assisted lipofection increases cytoplasmic plasmid in nondividing endothelium with little enhancement of transgene expression. Journal of Gene Medicine. 4:75 (2002).

I.J. Laurenzi, S.L. Diamond. Multicomponent Aggregation and Gel Formation via Simultaneous Convection and Diffusion. I.E.C.&R. 40: 413 (2002).

E.Y.H. Park, M.J. Smith, E. S. Stropp, J. A. Diveietro, W. F. Walker, D.W. Schmidtke, S.L.Diamond, M.B. Lawrence. Comparison of PSGL-1 microbead and neutrophil rolling: Microvillus elongation stabilizes P-selectin clusters. Biophysical Journal. 82, 1835 (2002).

JM. Abrahams, C Song, MS Grady, SL Diamond, RJ Levy. Endovascular Microcoil Gene Delivery Using Immobilized Anti-adenovirus Antibody for Vector Tethering. Stroke. 33, 1376 (2002).

I.J. Laurenzi, J.D. Bartels, S.L. Diamond. A general algorithm for exact numerical simulation of multi-component aggregation. Journal of Computational Physics. 177, 418 (2002).

H. Ma, J. Zhu, M. Maronski, V.M.Y. Lee, M. Dichter, S.L. Diamond. Nonclassical nuclear localization signal peptides for high efficiency lipofection of primary neurons and neuronal cell lines. Neuroscience. 111, 1 (2002).

T. A. Doggett, G. Girdhar, A. Lawshe, D. W. Schmidtke, I. J. Laurenzi, S. L. Diamond, T. G. Diacovo. Selectin-like Kinetics and Biomechanics Promote Rapid Platelet Adhesion in Flow: The GPIb[alpha]-vWF Tether Bond. Biophysical Journal. 83, 194, (2002).

J. M. Abrahams, M.S. Forman, M. S. Grady, S. L. Diamond. Delivery of human vascular endothelial growth factor with platinum coils enhances wall thickening and coil impregnation in a rat aneurysm model. American Journal of Neuroradiology. 22,1410 (2001).

J.M. Abrahams, M. S. Forman, M. S. Grady, and S. L. Diamond. Biodegradable polyglycolide endovascular coils promote wall thickening and drug delivery in a rat aneurysm model. Neurosurgery. 49, 1187 (2001).

M. Goel, S.L. Diamond. Neutrophil enhancement of fibrin deposition under flow though platelet-independent and platelet-dependent mechanisms. Arteriolsclerosis, Thrombosis, and Vascular Biology 21, 2093 (2001).

D. W. Schmidtke and S. L. Diamond, "High resolution imaging of membrane tethers formed during neutrophil attachment to adherent platelets of P-selectin in physiological shear flow," Journal of Cell Biology 149:719 (2000).

W. J. Calvo, G. Hajduczok, J. A. Russell and S. L. Diamond, "Inhibition of nitric oxide but not prostacyclin prevents poststenotic dilation in rabbit femoral artery," Circulation 99, 1069 (1999).

S. L. Diamond, "Engineering Design of Optimal Strategies for Blood Clot Dissolution," Annual Reviews of Biomedical Engineering 1:427 (1999).

A. Subramanian, P. Ranganathan and S. L. Diamond, "Nuclear targeting peptide scaffolds for lipofection of nondividing mammalian cells," Nature Biotechnology 17, 873 (1999).

I. Laurenzi and S. L. Diamond, "Monte Carlo simulation of the heterotypic aggregation kinetics of platelets and neutrophils," Biophysical Journal.77, 1733 (1999).

P. Tandon and S. L. Diamond.  "Kinetics of b2-integrin and L-selectin bonding during neutrophil aggregation in shear flow," Biophysical Journal. 75, 3163 (1998).

A. Subramanian and S.L. Diamond. "Enhancement of nonviral gene transfer to endothelial cells using lipofection of histone complexed DNA," Tissue Engineering, 3, 39 (1997).

W. Wang and S.L. Diamond. "Does elevated nitric oxide production enhance the release of prostacyclin from shear stressed aortic endothelial cells?," Biochemical and Biophysical Research Communications, 233, 748 (1997).

P. Tandon and S.L. Diamond. "Hydrogynamic effects and receptor interactions of platelets and their aggregates on linear shear flow," Biophysical Journal., 71, 2819 (1997).

S. Anand and S. L. Diamond. "Computer Simulation of Systemic Circulation and Clot Lysis Dynamics During Thrombolytic Therapy That Accounts for Inner Clot Transport and Reaction," Circulation, 94, 763 (1996).

D.S. Vaidya, J.M. Nitsche, S.L. Diamond and D.A. Kofke. "Convection-Diffusion of Solutes in Media with Piecewise Constant Transport Properties," Chemical Engineering Science, 51, 5299 (1996).

J. H. Wu and S. L. Diamond. "Tissue Plasminogen Activator Inhibits Plasmin Degradation of Fibrin: A Mechanism that Slows tPA-mediated Fibrinolysis but Does Not Require a2-antiplasmin or Leakage of Intrinsic Plasminogen," Journal of Clinical Investigation, 95, 2483 (1995).

V. Ranjan, S. Z. Xiao, and S. L. Diamond. "Constitutive NOS Expression in Cultured Endothelial Cells is Elevated by Fluid Shear Stress," American Journal of Physiology., 268, H550 (1995).

W. Sigurdson, F. Sachs, and S. L. Diamond, "Mechanical Perturbation of Cultured Human Endothelial Cells Causes Rapid Increases of Intracellular Calcium," American Journal of Physiology., 264, H1745 (1993).

S. L. Diamond and S. Anand, "Inner Clot Diffusion and Permeation During Fibrinolysis," Biophysical Journal., 65, 2622 (1993).

J. B. Sharefkin, S. L. Diamond, S. G. Eskin, C. Dieffenbach, and L. V. McIntire, "Fluid Flow Decreases Endothelin mRNA Levels and Suppresses Endothelin Peptide Release in Human Endothelial Cells," Journal of Vascular Surgery, 14, 1 (1991).

S. L. Diamond, S. G. Eskin, and L. V. McIntire, "Fluid Flow Stimulates Tissue Plasminogen Activator Secretion by Cultured Human Endothelial Cells," Science, 243, 1483 (1989).